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Biotech Company Finance Guide Australia: Accounting, Grant Management & Burn Rate Reporting

Australian biotech company CFO reviewing R&D expenditure reports and cash runway projections on financial dashboard

Last Updated: December 2025

Disclaimer: This guide provides general information only and does not constitute tax, legal, or financial advice. R&D Tax Incentive eligibility, grant conditions, and reporting requirements change regularly and depend on your specific circumstances. Always register R&D activities with AusIndustry before year end, consult with an R&D tax specialist for incentive claims, and seek professional advice for your specific situation.

TL;DR: The Gist

The Main Point

Biotech companies have unique financial management requirements that differ fundamentally from typical businesses. Your primary focus is managing cash runway while tracking R&D expenditure in ways that support tax incentive claims, grant acquittals, and investor reporting.

Three Key Benefits of Getting This Right

  1. Maximised R&D tax incentive. Properly structured expense tracking ensures you capture all eligible R&D expenditure and can substantiate claims if reviewed by AusIndustry or the ATO.
  2. Clean grant acquittals. When grants require expenditure reporting, accurate project-based accounting makes acquittal straightforward rather than a scramble to reconstruct spending.
  3. Investor-ready financials. Your profit and loss and cash flow statements tell the story investors need to hear, clearly showing burn rate, runway, and how funds are being deployed.

Why You Need to Act Now

Biotech companies that lack proper R&D expenditure tracking leave money on the table with their tax incentive claims and risk having claims reduced on review. With AusIndustry increasing scrutiny of biotech R&D claims, companies without robust documentation face significant exposure. Getting your systems right before the next capital raise or grant application is far easier than fixing them retrospectively.

Context and The Australian Landscape

Why This Matters for Your Business

Australian biotech operates in a unique financial environment. Most companies are pre-revenue or early-revenue, funded by equity raises, grants, and the R&D Tax Incentive. Traditional profitability metrics do not apply. Instead, financial management focuses on runway extension, R&D efficiency, and milestone achievement.

The Australian biotech sector includes approximately 600 companies, from university spin-outs through to ASX-listed clinical-stage firms. The R&D Tax Incentive provides refundable tax offsets of 43.5 percent for eligible companies with turnover under $20 million, making it a critical funding source. Properly capturing eligible expenditure can mean hundreds of thousands of dollars annually.

Grants from bodies like MRFF, NHMRC, and state innovation programs provide non-dilutive funding but require meticulous expenditure tracking and acquittal reporting. Poor financial systems create grant compliance risk.

The Specific Challenges Australian Biotechs Face

- R&D expenditure classification. Not all spending is R&D eligible. Core R&D activities, supporting activities, and excluded expenditure must be identified and tracked separately. Getting this wrong means either missing legitimate claims or making claims that cannot be substantiated.

- Grant milestone tracking. Grants often fund specific project components with defined deliverables. Expenditure must be allocated accurately to grant-funded activities and reported according to funding body requirements.

- Burn rate management. With limited revenue, cash management is existential. Understanding your monthly burn rate and runway is essential for timing capital raises and managing investor expectations.

- Milestone revenue recognition. Licensing deals and partnerships often involve upfront payments, milestone payments, and royalties. Each has different recognition treatment under accounting standards.

- Multi-currency transactions. Biotech companies often engage overseas CROs, purchase reagents internationally, and receive funding in foreign currencies. Exchange rate movements affect both costs and cash position.

- Investor reporting. Shareholders and potential investors require clear financial reporting showing how funds are deployed, R&D progress, and cash runway.

Core Principles: Foundational Knowledge

Key Definitions

1. R&D Tax Incentive is the Australian Government program providing tax offsets for eligible R&D expenditure. Companies with turnover under $20 million receive a 43.5 percent refundable offset (please consult your R&D advisor for most recent rules)

2. Core R&D activities are experimental activities whose outcome cannot be known in advance, conducted to generate new knowledge. These are fully eligible for the incentive.

3. Supporting R&D activities are directly related to core activities and undertaken for the dominant purpose of supporting core R&D. These are also eligible.

4. Burn rate is monthly cash expenditure. For pre-revenue biotechs, this drives runway calculations.

5. Runway is how long current cash will last at the current burn rate. Calculated as cash balance divided by monthly burn rate.

6. Grant acquittal is the process of reporting to funding bodies how grant funds were spent, demonstrating compliance with grant conditions.

Understanding Your Profit and Loss Statement

Biotech P&L statements look different from typical businesses. Here is how to read yours.

Revenue section:

For pre-revenue companies, this may show only R&D Tax Incentive income, grant income, and interest. For companies with licensing deals, milestone payments and royalty revenue appear here.

R&D Tax Incentive income should be recognised when receipt is virtually certain, typically when you lodge your application with a supportable claim.

Grant income recognition depends on grant conditions. If grants have specific performance obligations, recognise revenue as obligations are met. If grants are effectively cost reimbursements, recognise as eligible costs are incurred.

Expenditure section:

Structure your expenses to show R&D activities clearly:

  1. R&D Employee Costs: Salaries and on-costs for staff performing R&D
  2. R&D Contractor Costs: CROs, consultants, and contractors on R&D activities
  3. R&D Consumables: Reagents, materials, and supplies
  4. R&D Equipment and Depreciation: Lab equipment depreciation and small equipment purchases
  5. R&D Facility Costs: Rent and utilities for R&D facilities
  6. Clinical Trial Costs: Trial-specific expenditure
  7. IP and Regulatory Costs: Patent costs, regulatory submissions
  8. Corporate Costs: Administration, insurance, legal, accounting

This structure supports R&D Tax Incentive claims by clearly identifying eligible categories.

Net result:

Pre-revenue biotechs typically show net losses. This is expected. The relevant question is whether the loss is funded (through cash on hand, committed grants, or imminent raises) and whether spending is efficient relative to R&D progress.

Common Financial Mistakes

  1. Poor R&D expenditure segregation. Lumping all costs together makes R&D Tax Incentive claims difficult to substantiate and increases review risk. Track R&D and non-R&D expenditure separately from the start.
  2. Inadequate contemporaneous records. The R&D Tax Incentive requires documented evidence of activities at the time they occur. Retrospective reconstruction of R&D records is risky and often incomplete.
  3. Grant income recognition errors. Recognising grant income before obligations are met overstates revenue. Recognising too late understates it. Match recognition to the grant agreement terms.
  4. Ignoring burn rate changes. Monthly burn rate fluctuates with trial phases, hiring, and capital equipment purchases. Track trends, not just snapshots.
  5. Failing to track expenditure by project. When you have multiple programs or grants, project-level tracking is essential. Without it, grant acquittals become guesswork.

Step-by-Step Implementation

Phase 1: Structure Your Chart of Accounts

Revenue categories:

  1. R&D Tax Incentive Income
  2. Grant Income (separate account per major grant)
  3. Licensing Revenue - Upfront Payments
  4. Licensing Revenue - Milestone Payments
  5. Licensing Revenue - Royalties
  6. Other Income

R&D expenditure categories:

  1. R&D Salaries and Wages
  2. R&D Superannuation
  3. R&D Contractor and CRO Costs
  4. R&D Consumables and Reagents
  5. R&D Equipment (under capitalisation threshold)
  6. R&D Equipment Depreciation
  7. R&D Facility Costs
  8. Clinical Trial Costs
  9. Regulatory and IP Costs

Corporate expenditure categories:

  1. Corporate Salaries (non-R&D staff)
  2. Professional Fees
  3. Insurance
  4. Corporate Travel
  5. Office and Administration
  6. ASX and Registry Costs (if listed)

Phase 2: Implement Project Tracking

Create project codes for:

  1. Each R&D program or drug candidate
  2. Each grant-funded activity
  3. Corporate and overhead activities

Track all expenditure against project codes. This enables R&D claims by activity, grant acquittal reporting, and investor reporting by program.

Phase 3: R&D Documentation Practices

Maintain contemporaneous records including:

  1. Lab notebooks documenting experimental work
  2. Project plans identifying core and supporting R&D activities
  3. Time records showing staff allocation to R&D projects
  4. Contractor agreements specifying R&D scope
  5. Board and management reports discussing R&D progress

These records support R&D Tax Incentive claims and demonstrate activities were conducted as claimed.

Phase 4: Monthly Financial Review

Cash and runway:

  1. Calculate current cash position
  2. Calculate average monthly burn rate (3-month rolling average)
  3. Calculate runway in months
  4. Compare to upcoming milestones and funding needs

R&D tracking:

  1. Review R&D expenditure against budget
  2. Ensure all R&D costs are properly categorised
  3. Update R&D Tax Incentive claim estimate

Grant compliance:

  1. Review expenditure against grant budgets
  2. Prepare acquittal documentation
  3. Flag any potential compliance issues

Technology and Tools

Recommended Software

Accounting: Xero Business at $78 monthly handles most biotech requirements. Use tracking categories for project allocation. The multi-currency features handle international transactions.

For complex requirements, MYOB Advanced or NetSuite provide more sophisticated project accounting but at significantly higher cost.

R&D tracking: Dedicated R&D management software like LabArchives for electronic lab notebooks helps maintain contemporaneous records.

Budgeting and forecasting: Float at $59 monthly integrates with Xero for cash flow forecasting. Essential for runway management.

Example costs for 15-person biotech:

  1. Xero Business: $78 monthly ($936 annually)
  2. Float: $59 monthly ($708 annually)
  3. LabArchives: $100 per user monthly for core R&D staff, say 8 users ($9,600 annually)
  4. Total: approximately $11,200 annually

Key Performance Indicators

Financial KPIs:

  1. Monthly burn rate (and trend)
  2. Runway in months
  3. R&D spend as percentage of total expenditure (target 70 percent or higher for pre-revenue)
  4. R&D Tax Incentive yield (refund as percentage of eligible R&D spend)

Operational KPIs:

  1. Cash per milestone achieved
  2. R&D spend by program
  3. Grant utilisation rate (spend versus budget)
  4. Time to next funding requirement

Frequently Asked Questions

How should biotech companies track R&D expenditure?

Separate R&D expenditure by category (salaries, contractors, consumables, equipment, facilities) and by project or program. Use accounting software tracking categories to tag transactions. Maintain contemporaneous documentation of R&D activities including lab notebooks, project plans, and time records.

What is a healthy burn rate for an Australian biotech?

There is no universal answer as burn rate depends on development stage. Pre-clinical companies might burn $100,000 to $300,000 monthly. Clinical-stage companies conducting trials might burn $500,000 to $2 million monthly. The key metric is runway relative to the next value inflection point or funding milestone.

How should grant income be recognised?

Recognition depends on grant conditions. If grants require specific deliverables, recognise revenue as deliverables are achieved. If grants reimburse eligible expenditure, recognise as expenditure is incurred. If grants have no conditions, recognise on receipt. Review each grant agreement carefully.

What contemporaneous records support R&D Tax Incentive claims?

Key records include lab notebooks with dated entries, project plans identifying experimental activities, time records showing staff allocation to R&D, contractor agreements specifying R&D scope, ethics approvals, and board or scientific advisory committee minutes discussing R&D progress. Create these records as activities occur, not retrospectively.

How should biotechs report to investors?

Investors want to see cash position and runway, burn rate trends, R&D expenditure by program, progress against milestones, and key risks. A monthly or quarterly investor update should include P&L summary, cash flow, and narrative on R&D progress. Keep reporting consistent so investors can track trends.

About Scale Suite

Scale Suite delivers embedded finance and human resource services for ambitious Australian businesses. Our Sydney-based team integrates with your daily operations, working like part of your internal staff but with senior-level expertise.

About Scale Suite

Scale Suite delivers embedded finance and human resource services for ambitious Australian businesses.Our Sydney-based team integrates with your daily operations through a shared platform, working like part of your internal staff but with senior-level expertise. From complete bookkeeping to strategic CFO insights, we deliver better outcomes than a single hire - without the recruitment risk, training time, or full-time salary commitment.

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