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Finance for Psychology Practices: Contractors, Payroll Tax and Profit Per Clinician

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Many psychology practices run on a service fee model. Contractor psychologists see clients, the practice provides rooms, reception and billing, and the practice keeps a percentage. Depending on how the arrangement works in practice, payments to those psychologists may be treated as wages for payroll tax where the contract meets the "relevant contract" rules and no exemption applies. The substance decides it: who bills the client, who sets fees and hours, and whether the clinician works mainly for your practice. For a practice above the payroll tax threshold, getting this wrong can be expensive, and assessments can reach back several years.

Last checked: 11 October 2026.

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What Makes Psychology Practice Finance Different?

  • Mixed revenue sources: private clients, Medicare rebates, NDIS, workers compensation, private health insurers and EAP providers, each with different timing and paperwork.
  • A contractor-heavy workforce, which is where payroll tax questions arise.
  • Capacity-driven profit: revenue is capped by clinician hours and room hours.
  • Service entity structures: these can be legitimate, but they need to work for income tax and payroll tax together.

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Payroll Tax and Contractor Psychologists

The rule: relevant contracts and medical centres

On 11 August 2023, Revenue NSW and the Victorian State Revenue Office issued harmonised Revenue Ruling PTA 041 (Relevant contracts – medical centres). Victoria said the ruling is harmonised with rulings in Queensland and South Australia. It explains when a contract between a medical centre business and a practitioner is a "relevant contract", which deems payments to the practitioner to be wages for payroll tax.

The ruling applies to medical centre businesses "including dental clinics, physiotherapy practices, radiology centres and similar healthcare providers" that contract with practitioners to give patients access to their services (Revenue NSW PTA 041; SRO Victoria PTA-041). A psychology practice that holds out to the public that it provides access to psychologists may be in a similar position.

The case behind it

In Thomas and Naaz Pty Ltd v Chief Commissioner of State Revenue, the practice collected Medicare benefits on the doctors' behalf, kept a 30% service fee and paid out 70%. The NSW Civil and Administrative Tribunal held the agreements were relevant contracts and the 70% payments were taxable wages ([2021] NSWCATAD 259). The NSW Court of Appeal refused leave to appeal ([2023] NSWCA 40, 14 March 2023) (Revenue NSW case summary).

The exemptions to test

PTA 041 names the three exemptions most likely to apply to a medical centre and practitioner contract:

  1. The practitioner provides services to the public generally in that financial year. In NSW, a determination from the Commissioner is required before claiming this, unless the "10 days or less per month" method is used.
  2. The practitioner performs work for no more than 90 days in a financial year.
  3. The services are performed by two or more persons.

You must be able to substantiate any exemption you claim.

What drives the risk

Factors that can point toward a relevant contract:

  • The practice collects all fees and pays the clinician a share
  • The practice sets fees, hours or leave arrangements
  • The clinician works mainly or only for your practice
  • The clinician treats clients on the practice's behalf, rather than running their own practice from your rooms

Arrangements where the clinician bills clients directly and pays the practice for rooms and services can produce a different outcome, depending on the facts. Get advice from a payroll tax adviser or lawyer, and review payroll tax and income tax treatment together. Changing the paperwork without changing the substance is unlikely to change the result.

GP relief does not extend to psychologists

NSW provides payroll tax relief for medical centres that engage GP contractors. This includes a rebate from 4 September 2024 linked to bulk-billing thresholds. Revenue NSW states the rebate does not extend to "non-GP specialists or any allied health service providers" (Revenue NSW). Queensland's GP amnesty also excluded allied health professionals (QRO). Other states and territories set their own rules, so check with the relevant revenue office before assuming any relief applies to a psychology practice.

Hypothetical example: the payroll tax exposure

Assumptions: a Sydney practice with 12 contractor psychologists, $2.4 million in client fees a year, a 35% service fee retained, all contracts relevant contracts, no exemption, no other wages, and no grouping.

  • Payments to contractors: $2,400,000 × 65% = $1,560,000
  • NSW 2026-27 threshold and rate: $1,200,000 and 5.45% (Revenue NSW)
  • Taxable amount: $1,560,000 − $1,200,000 = $360,000
  • Annual payroll tax: $360,000 × 5.45% = $19,620

Victorian practices: don't apply the NSW figures. Victoria's annual threshold is $1,000,000 and the rate is 4.85%, or 1.2125% for eligible regional Victorian employers, and the threshold phases out for groups with Australian wages between $3 million and $5 million: the $1,000,000 deduction falls by 50 cents for each dollar of wages above $3 million (SRO Victoria). On the same assumptions, with wages well under $3 million so no phase-out applies, a Melbourne practice would pay ($1,560,000 − $1,000,000) × 4.85% = $27,160 a year. On contractors, Victoria's relevant contract provisions are harmonised with NSW's, and its State Revenue Office issued its own PTA-041 on medical centres on the same day as Revenue NSW, so the relevant contract analysis above applies there too. Victoria's own GP relief is different from NSW's: from 1 July 2025 it exempts GP wages for fully-funded (bulk-billed) work only, and the State Revenue Office says it does not apply to allied health professionals, so it does not help a psychology practice (SRO Victoria, medical industry).

Over five years with no change in the business, that would be about $98,100 before interest and penalties. Employee wages (for example admin staff) count toward the same threshold. See payroll tax on contractors, NSW payroll tax and the payroll tax threshold calculator.

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Revenue: Getting Paid Correctly and On Time

  • Separate each funding source in Xero. Set up accounts or tracking categories for private fees, Medicare, NDIS, workers compensation and EAP, so you can see which payer is slow.
  • Reconcile Medicare deposits to sessions. Deposits arrive in batches. A monthly check of claimed versus paid sessions picks up rejected claims while they can still be fixed.
  • Track debtor days by payer. See debtor management strategies.
  • Track cancellations. Record late cancellations and no-shows per clinician, and the fees actually collected.

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Medicare, Gap Fees and Billing Choices

How a Medicare-rebated session flows through the books

Under the Better Access initiative, eligible clients with a valid referral can claim a Medicare rebate for a limited number of psychology sessions each calendar year. Rebate amounts are set in the Medicare Benefits Schedule (MBS), and they are higher for clinical psychologists than for registered psychologists. The client pays the practice fee and claims the rebate, or the session is bulk billed and Medicare pays the rebate to the practitioner as full payment. Check current item numbers and rebate amounts on MBS Online before you set fees.

Hypothetical example: the gap fee and bulk billing

Assumptions: a $250 private fee, a Medicare rebate of $100 and a 35% service fee. The rebate is illustrative only, not the current MBS amount.

  • Client's out-of-pocket gap: $250 − $100 = $150 a session
  • If the session is bulk billed instead, fee income is the rebate only: $100, which is $150 less
  • At 20 sessions a week for 46 weeks (920 sessions), moving one clinician from private billing to bulk billing reduces fee income by 920 × $150 = $138,000 a year
  • The practice's share of that at a 35% service fee: $138,000 × 35% = $48,300 a year

Bulk billing can still be the right choice for access reasons. The point is to make the decision with the numbers in front of you.

NDIS clients

Psychology for NDIS participants is paid from the participant's plan. Depending on how the plan is managed, payment comes from the NDIA (agency-managed), a plan manager or the participant (self-managed), each with its own claiming process and timing. Only registered NDIS providers can claim for agency-managed participants. Maximum prices for therapy supports are set in the NDIS Pricing Arrangements and Price Limits, which are reviewed each year (NDIS). Keep NDIS receivables in their own account, reconcile each payment to the claim, and keep a signed service agreement for each participant.

GST: GST-free fees, taxable service fees

Psychology services are generally GST-free when supplied by a recognised professional and generally accepted in the profession as necessary for the client's appropriate treatment (GST Act, section 38-10). Two points catch practices out:

  • Service fees charged to contractors are a different supply. The fee a practice charges a contractor psychologist for rooms, reception and billing is supplied to the psychologist, not to a client. It is generally a taxable supply if the practice is registered for GST.
  • GST-free is not input-taxed. A practice making GST-free supplies can still claim GST credits on its rent, fit-out and software, so a practice with mostly GST-free fee income can be in a refund position on its BAS.

Code every revenue stream and every service fee with the right tax code, so the BAS reflects the actual supplies.

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Profit Per Clinician and Room Utilisation

Clinician utilisation

Utilisation is booked sessions divided by available sessions. A clinician available for 25 sessions a week who sees 20 is at 80%.

Hypothetical: a $250 session fee and a 35% service fee. Each unused session costs the practice $87.50. Five unused sessions a week across 46 weeks is 230 sessions, or $20,125 a year in practice income per clinician.

Room utilisation

Hypothetical: 8 rooms open 50 hours a week give 400 room hours. Booking 260 of them is 65% utilisation. The options are more clinicians, longer hours, or giving up a room at lease renewal.

Contribution per clinician

Take the service fee income retained, less allocated direct costs (reception time, software, room share). The result is the clinician's contribution. See job and project profitability.

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Room-Fee and Percentage Models Compared

  • Percentage (service fee) model: the practice collects fees, keeps a percentage and pays out the rest. Practice income rises and falls with clinician activity. The practice collecting fees is one of the factors that can point toward a relevant contract.
  • Room-fee (licence) model: the clinician bills clients directly and pays the practice a fixed fee per session, day or month. Practice income is more predictable, but it doesn't rise when the clinician is busier, and an empty room costs the practice.

Neither model settles payroll tax by itself. The substance of the whole arrangement decides it.

Hypothetical example: which model earns the practice more?

Assumptions: a clinician charges $250 a session and sees 22 sessions a week for 46 weeks (1,012 sessions). Option A is a 35% service fee. Option B is a room fee of $450 a day for 4 days a week, 46 weeks a year.

  • Option A: 1,012 × $250 × 35% = $88,550
  • Option B: $450 × 4 × 46 = $82,800
  • Break-even: $82,800 ÷ ($250 × 35%) = 946.3 sessions a year, or about 20.6 sessions a week

Above about 20.6 sessions a week, the percentage model earns the practice more. Below it, the room fee does.

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Cash Flow and Tax Timing

  • Payer timing: private fees arrive on the day, Medicare and NDIS on their own cycles, and workers compensation and EAP providers often on 30-day or longer terms.
  • Payroll tax: in NSW, monthly returns are due 7 days after the end of each month, and the annual reconciliation is due 28 July (Revenue NSW).
  • Super: under Payday Super, super for employees must be received by the fund within 7 business days after payday.
  • BAS: monthly or quarterly, depending on your registration. Set aside GST on taxable service fees and PAYG withholding as they accrue.
  • A 13-week cashflow forecast shows the low points before they arrive.

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A KPI Dashboard for a Psychology Practice

Report these monthly:

  • Utilisation per clinician (booked ÷ available sessions)
  • Room utilisation (booked ÷ available room hours)
  • Average fee per session, by payer
  • Cancellation and no-show rate, and the fees recovered
  • Debtor days by payer (Medicare, NDIS, workers compensation, EAP)
  • Rejected or unpaid claims outstanding
  • Contribution per clinician
  • Payroll tax exposure against the threshold
  • Cash on hand and cash runway

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Employed or Contractor? A Checklist

Several different tests can apply to the same clinician, and they don't always give the same answer:

  • Employment law: since 26 August 2024, the Fair Work Act requires the real substance and practical reality of the whole relationship to be considered, not only the written contract.
  • Income tax: PAYG withholding obligations depend on whether the clinician is an employee under the common law test.
  • Superannuation: the super guarantee can apply to a contractor paid wholly or principally for their labour.
  • Payroll tax: the relevant contract rules above, with their own exemptions.

Questions to ask for each clinician:

  1. Who sets the fees, and who bills and collects them?
  2. Who bears the risk of bad debts and cancellations?
  3. Does the clinician have their own ABN, professional indemnity insurance and a Medicare provider number for your location?
  4. Can they see clients elsewhere and build their own practice?
  5. Do they set their own hours and leave?
  6. Can they send someone else to do the work?
  7. Do they provide services to the public generally?
  8. What evidence do you hold for any payroll tax exemption?

Get advice on the answers. They affect payroll tax, super and employment obligations at the same time.

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Employed Staff and the HPSS Award

Employed psychologists and support staff are commonly covered by the Health Professionals and Support Services Award. From 1 October 2026, health professionals are classified by AQF level and years of experience. Psychologist is listed at AQF Level 9, with a Level 1 starting rate of $1,444.90 a week (award, cl 17 and Schedule B). See our Health Professionals Award reference.

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Monthly Finance Rhythm

  1. Reconcile bank accounts and Medicare deposits weekly.
  2. Match clinician payments to sessions delivered and fees collected.
  3. Review rejected and unpaid claims by payer.
  4. Report utilisation per clinician and per room.
  5. Report contribution per clinician.
  6. Track payroll tax exposure against the threshold, including contractor payments and any exemption evidence.
  7. Review 13-week cashflow, including tax and super dates.

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FAQ

Do psychology practices pay payroll tax on contractor psychologists?

They can. Payments may be treated as wages where the arrangement meets the relevant contract rules and no exemption applies (Revenue Ruling PTA 041). The outcome depends on the facts.

Does the NSW GP payroll tax relief apply to psychologists?

No. Revenue NSW states the rebate does not extend to allied health service providers.

Which exemptions should a practice check?

Services to the public generally, work of 90 days or less in a financial year, and services performed by two or more persons. Each needs evidence.

Do psychology practices charge GST?

Psychology services that meet the GST-free health rules are generally GST-free. Service fees the practice charges contractor psychologists are generally taxable if the practice is registered for GST.

Does a room-fee model avoid payroll tax?

Not automatically. The outcome depends on the substance of the whole arrangement, not the name of the fee.

Do I pay super for contractor psychologists?

Possibly. The super guarantee can apply to contractors paid wholly or principally for their labour. Get advice on each arrangement.

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About Scale Suite

Scale Suite provides embedded finance teams for Australian health practices and SMEs. Visit Scale Suite | Multi-entity and group finance | Outsourced payroll

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Disclaimer

General information only, current as at October 2026. Scale Suite is a registered BAS Agent, not a licensed tax, financial or legal adviser. Payroll tax outcomes depend on the facts. Get advice on your arrangements.

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Sources

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About Scale Suite

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